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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1147276 chr12:127501898 C/T NOC4L chr12:132628993-132637018:+ 0.64 6.04 3.57E-9 Box Plot
BLCA rs1148645 chr4:151824966 A/C LOC100130932 chr19:14599758-14600688:+ -0.56 -6.22 1.3E-9 Box Plot
BLCA rs1148645 chr4:151824966 A/C POU2F1 chr1:167190066-167396582:+ -0.59 -5.97 5.4E-9 Box Plot
BLCA rs1148645 chr4:151824966 A/C ZMYND17 chr10:75180397-75193319:- 0.54 7.1 6.01E-12 Box Plot
BLCA rs1149278 chr6:105407760 A/G ASCC3 chr6:100956070-101329248:- 0.57 6.05 3.46E-9 Box Plot
BLCA rs1149278 chr6:105407760 A/G C6orf167 chr6:97590038-97731061:- 0.59 6.28 9.02E-10 Box Plot
BLCA rs1149278 chr6:105407760 A/G CCNC chr6:99990256-100016849:- 0.79 6.22 1.3E-9 Box Plot
BLCA rs11501934 chr11:77668019 C/T INTS4L1 chr7:64601603-64694600:+ 0.5 6.96 1.49E-11 Box Plot
BLCA rs11512422 chr11:6688808 C/T ZNF408 chr11:46722368-46727462:+ 0.38 6.38 5.0E-10 Box Plot
BLCA rs115277096 chr5:38863810 T/G CT47A9 chrX:120077415-120080737:- 0.22 6.6 1.41E-10 Box Plot
BLCA rs115369137 chr13:78367681 A/G CD53 chr1:111415776-111442550:+ 0.17 6.12 2.35E-9 Box Plot
BLCA rs1154050 chr8:4283747 G/T PPP2R2A chr8:26149007-26230196:+ -0.76 -6.08 2.86E-9 Box Plot
BLCA rs11540565 chr15:91510282 G/A LEPR chr1:65886335-66107242:+ 0.71 6.1 2.64E-9 Box Plot
BLCA rs11574294 chr8:30969978 C/T CCDC25 chr8:27590828-27630170:- -0.73 -6.05 3.48E-9 Box Plot
BLCA rs11574294 chr8:30969978 C/T CNOT7 chr8:17082473-17104387:- -0.71 -6.02 4.05E-9 Box Plot